Versatile tool for DNA/RNA sequence searching and clustering in microbiome analysis
Versatile open-source tool for microbiome analysis
vsearch$ vsearch --derep_fulllength input.fasta --output dereplicated.fasta$ vsearch --cluster_size sequences.fasta --id 0.97 --centroids clusters.fasta$ vsearch --usearch_global query.fasta --db reference.fasta --id 0.9 --uc results.uc