npm

ropebwt3

BWT construction and search tool for DNA sequences

brewmacoslinux
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About

BWT construction and search

Commands

ropebwt3

Examples

Build a BWT index from a FASTA file$ ropebwt3 -o index.bwt sequences.fa
Search for a sequence pattern in the BWT index$ ropebwt3 -s pattern index.bwt
Construct BWT from multiple input files$ ropebwt3 file1.fa file2.fa file3.fa > combined.bwt