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mrbayes

Bayesian inference of phylogenies and evolutionary models

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Bayesian inference of phylogenies and evolutionary models

Commands

mb

Examples

run phylogenetic analysis on DNA sequences$ mb mydata.nex
analyze protein evolution models$ mb proteins.nex
estimate divergence time between species$ mb -i clock_model.nex
perform multiple independent MCMC runs in parallel$ mb nruns=4 nchains=4 savebrlens=yes myanalysis.nex
summarize and visualize posterior trees from analysis$ mb sumt relburnin=yes burninfrac=0.25 outputname=summary