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libbi

Bayesian state-space modelling on parallel computer hardware

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About

Bayesian state-space modelling on parallel computer hardware

Commands

libbi

Examples

Initialize a new LibBi project with sample model$ libbi sample --model-file model.bi --nsamples 1000
Run particle filter inference on a model$ libbi filter --model-file model.bi --input-file data.nc
Execute particle Markov chain Monte Carlo for parameter inference$ libbi pmmh --model-file model.bi --input-file data.nc --nsamples 5000