htslib

C library for reading/writing high-throughput sequencing data formats

brewmacoslinux

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C library for high-throughput sequencing data formats

bgziphtsfiletabix

Compress a VCF file with block gzip compression$ bgzip -c input.vcf > input.vcf.gz

Index a bgzipped VCF file for fast random access$ tabix -p vcf input.vcf.gz

Detect file format of a sequence data file$ htsfile input.bam