augustus

Gene prediction tool for eukaryotic genomic sequences

brewmacoslinux

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Predict genes in eukaryotic genomic sequences

augustusetrainingprepareAlign

Predict genes in a DNA sequence using human model$ augustus --species=human input.fasta

Predict genes with specific output format and gene model$ augustus --species=arabidopsis --outfile=predictions.gff input.fasta

Train Augustus on aligned sequences for custom species$ etraining --species=myspecies aligned_sequences.fa